STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML38768.1Flagellar brake protein YcgR. (234 aa)    
Predicted Functional Partners:
AML38767.1
Transcriptional regulatory protein TdiR.
       0.773
AML36013.1
Flagellar protein FliS.
  
  
 0.764
AML36012.1
Flagellar hook-associated protein 2.
  
  
 0.721
AML36062.1
Flagella synthesis protein FlgN.
  
  
 0.704
AML36050.1
Flagellar hook-associated protein 1.
  
  
 0.682
AML36061.1
Negative regulator of flagellin synthesis.
  
  
 0.670
AML36072.1
Chemotaxis protein CheW.
  
  
 0.657
AML36075.1
Motility protein A.
  
   0.653
AML36027.1
Flagellar motor switch protein FliM.
  
 
 0.644
AML36074.1
Motility protein B.
  
 
 0.614
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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