STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kduD_12-dehydro-3-deoxy-D-gluconate 5-dehydrogenase. (253 aa)    
Predicted Functional Partners:
AML36604.1
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase.
 
 0.982
uxuA_2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.922
ydjH_1
2-dehydro-3-deoxygluconokinase.
  
 0.921
garD_2
Altronate dehydratase.
  
  
 0.921
AML35382.1
Mannonate dehydratase.
 
 
 0.913
ydjH_2
2-dehydro-3-deoxygluconokinase.
   
 0.912
AML35476.1
Starvation-sensing protein RspA.
  
  
  0.911
AML38840.1
Putative oxidoreductase YgcW.
  
  
 
0.909
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.850
AML35886.1
Ribose-5-phosphate isomerase B.
  
 
 0.827
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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