STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hycEFormate hydrogenlyase subunit 5. (569 aa)    
Predicted Functional Partners:
hyfB
Formate hydrogenlyase subunit 3.
 
 
 0.999
hycD
Formate hydrogenlyase subunit 4.
 
 
 0.999
hycF
Formate hydrogenlyase subunit 6.
 
 
 0.999
hycG
Formate hydrogenlyase subunit 7.
 
 0.999
hyfA
Formate hydrogenlyase subunit 2.
 
 
 0.987
hypB
Hydrogenase isoenzymes nickel incorporation protein HypB.
 
 
 
 0.985
nuoI_2
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 
 0.978
nuoB_1
NADH-quinone oxidoreductase subunit B.
 
 0.974
hycI
Hydrogenase 3 maturation protease.
 
  
 0.974
porA
Putative pyruvate-flavodoxin oxidoreductase.
  
 
 0.973
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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