Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP31698.1Hypothetical protein; Esterase/lipase. (289 aa)    
Predicted Functional Partners:
ACP31695.1
Predicted membrane protein.
 
     0.908
ACP31697.1
Predicted metalloendopeptidase.
  
   0.847
pks13
Polyketide synthase modules and related proteins.
 
 
 0.789
ACP32875.1
Putative membrane protein.
  
     0.770
ACP32154.1
Hypothetical protein.
 
     0.769
tetA
ABC-type multidrug transport system ATPase and permease components.
  
   0.761
ACP31776.1
Putative protein rhsE; Rhs family protein.
  
     0.761
ACP33899.1
Putative secreted protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
   
 0.757
ACP33907.1
Hypothetical protein; AraC-type DNA-binding domain-containing proteins.
  
  
  0.748
ACP32244.1
Putative sodium-coupled neutral amino acid transporter 10; Amino acid permeases.
  
     0.742
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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