STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aftAArabinofuranosyl transferase A. (646 aa)    
Predicted Functional Partners:
embC
Arabinosyl transferase C.
 
  
 0.986
ACP33965.1
Putative membrane protein.
  
   
 0.938
aftC
Arabinofuranosyl transferase C.
  
   
 0.881
ACP31702.1
FAD/FMN-containing dehydrogenases.
 
   
 0.868
fabG3
Short-chain alcohol dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.863
ACP33944.1
Putative membrane protein.
  
   
 0.814
ACP31707.1
Predicted membrane protein.
 
   
 0.790
ACP32536.1
Uncharacterized membrane protein, required for N-linked glycosylation.
  
     0.773
ACP32325.1
Putative secreted protein.
  
     0.772
ACP32045.1
Putative membrane protein.
 
  
 0.770
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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