STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
fabG3Short-chain alcohol dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (252 aa)    
Predicted Functional Partners:
ACP31702.1
FAD/FMN-containing dehydrogenases.
 
  
 0.985
aftA
Arabinofuranosyl transferase A.
 
   
 0.863
ACP31706.1
Predicted membrane protein.
 
   
 0.855
embC
Arabinosyl transferase C.
 
   
 0.806
ACP31707.1
Predicted membrane protein.
 
   
 0.805
ubiA
Decaprenylphosphoryl-5-phosphoribose synthase; 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.790
ACP31703.1
Hypothetical protein.
       0.620
ACP31704.1
Putative membrane protein.
       0.546
ACP31705.1
Hypothetical protein.
       0.529
pks13
Polyketide synthase modules and related proteins.
  
 
 0.528
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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