STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP31713.1Putative ABC transport system, permease protein; ABC-type polysaccharide/polyol phosphate export systems permease component. (303 aa)    
Predicted Functional Partners:
ACP31712.1
Putative ABC transport system, ATP-binding protein; ABC-type polysaccharide/polyol phosphate transport system ATPase component.
 
 
 0.999
ACP31708.1
Predicted glycosyltransferases.
 
  
 0.941
ACP31714.1
Putative aminotransferase; Selenocysteine lyase.
 
     0.745
wbbL
Predicted glycosyltransferases.
 
  
 0.713
glfT
Predicted glycosyltransferases.
 
  
 0.683
glf
UDP-galactopyranose mutase.
  
  
 0.654
ACP32131.1
Hypothetical protein.
  
     0.619
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.578
cpsD
Sugar transferases involved in lipopolysaccharide synthesis.
     
 0.570
ACP32057.1
Hypothetical protein.
  
     0.527
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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