STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP31714.1Putative aminotransferase; Selenocysteine lyase. (403 aa)    
Predicted Functional Partners:
nifU
NifU homolog involved in Fe-S cluster formation.
  
 
 0.924
sufC
ABC-type transport system involved in Fe-S cluster assembly ATPase component.
  
  
 0.751
ACP31713.1
Putative ABC transport system, permease protein; ABC-type polysaccharide/polyol phosphate export systems permease component.
 
     0.745
ACP31712.1
Putative ABC transport system, ATP-binding protein; ABC-type polysaccharide/polyol phosphate transport system ATPase component.
 
     0.743
sufD
ABC-type transport system involved in Fe-S cluster assembly permease component.
  
 
 0.695
sufB
ABC-type transport system involved in Fe-S cluster assembly permease component.
  
 
 0.693
ACP32131.1
Hypothetical protein.
  
     0.609
ACP31708.1
Predicted glycosyltransferases.
 
     0.602
ACP32571.1
Hypothetical protein.
  
     0.583
ACP32877.1
Hypothetical protein.
  
     0.570
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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