STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnaXDNA polymerase III gamma/tau subunits. (868 aa)    
Predicted Functional Partners:
holB
DNA polymerase III, delta' subunit; ATPase involved in DNA replication.
 
 
0.992
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
   
 0.990
holA
DNA polymerase III delta subunit.
   
 0.988
dnaE1
DNA polymerase III alpha subunit.
 
 0.980
ACP33224.1
Hypothetical protein.
   
 0.963
dnaQ1
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
    
 0.946
dnaQ2
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
    
 0.946
dnaQ3
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
 0.946
ACP31774.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
  
  
 0.851
ssb1
Single-stranded DNA-binding protein.
  
 
 
 0.780
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.