STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP31794.1Predicted membrane protein. (483 aa)    
Predicted Functional Partners:
katA
Catalase.
       0.640
ACP32662.1
Putative membrane protein.
  
     0.543
sigC
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.538
ACP34021.1
Hypothetical protein.
  
    0.515
ACP33357.1
Hypothetical protein.
  
     0.438
lppL
Prolipoprotein LppL.
  
     0.437
mnhE
Multisubunit Na+/H+ antiporter, MnhE subunit.
 
     0.429
ACP31795.1
Putative membrane protein; AAA ATPase containing von Willebrand factor type A (vWA) domain.
       0.418
mnhD
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit.
 
     0.415
mrpC1
Multisubunit Na+/H+ antiporter, MnhC subunit.
 
     0.405
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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