STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP31809.1Hypothetical protein; DNA-directed RNA polymerase, beta subunit/140 kD subunit. (385 aa)    
Predicted Functional Partners:
ACP31692.1
Hypothetical protein.
  
    0.744
ACP32705.1
Hypothetical protein; Restriction endonuclease.
  
    0.744
ACP33111.1
Hypothetical protein; Restriction endonuclease.
  
    0.724
ACP32553.1
Large exoproteins involved in heme utilization or adhesion.
  
    0.703
ACP31810.1
Hypothetical protein.
       0.574
ACP31808.1
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain.
       0.483
ACP31806.1
Putative thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins.
       0.415
ACP31807.1
Putative NUDIX protein; NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.415
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.410
ACP33850.1
Putative peptide synthase.
  
    0.404
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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