STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppAABC-type oligopeptide transport system, periplasmic component. (531 aa)    
Predicted Functional Partners:
dppB
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.995
dppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.990
ACP32676.1
Putative Periplasmic oligopeptide-binding protein; ABC-type oligopeptide transport system, periplasmic component.
  
 
 
0.911
ACP33351.1
Putative Periplasmic oligopeptide-binding protein; ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.907
oppB2
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.783
dppD
Iron ABC transport system, ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.723
ACP31815.1
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
     
 0.561
ACP33421.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.505
gluC
ABC-type amino acid transport system permease component.
   
 
  0.496
ACP31973.1
Permease of the major facilitator superfamily; ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
     0.470
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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