STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP31821.1Putative membrane protein; Flp pilus assembly protein TadB. (249 aa)    
Predicted Functional Partners:
ACP31820.1
Hypothetical protein.
 
  
 0.945
ACP31822.1
Putative membrane protein; Flp pilus assembly protein TadC.
 
     0.933
ACP31819.1
Putative secreted protein; ATPases involved in chromosome partitioning.
 
     0.875
ACP31823.1
Putative membrane protein.
     
 0.768
ACP32428.1
Putative secreted protein.
 
  
 0.738
ACP31825.1
Putative membrane protein.
     
 0.706
ACP31824.1
Putative membrane protein.
       0.702
ACP33275.1
Hypothetical protein.
  
     0.647
ACP31817.1
Hypothetical protein.
 
     0.638
lpqB
Putative lipoprotein.
  
     0.614
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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