Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
holBDNA polymerase III, delta' subunit; ATPase involved in DNA replication. (415 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
 
 0.994
dnaX
DNA polymerase III gamma/tau subunits.
 
 
0.992
holA
DNA polymerase III delta subunit.
  
 
 0.992
dnaE1
DNA polymerase III alpha subunit.
  
 
 0.978
ACP33224.1
Hypothetical protein.
   
 0.931
dnaQ1
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
    
  0.922
dnaQ2
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
    
  0.922
dnaQ3
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
    
  0.922
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.901
dnaE2
DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
    
 
 0.757
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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