STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
holBDNA polymerase III, delta' subunit; ATPase involved in DNA replication. (415 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
 
 0.998
dnaX
DNA polymerase III gamma/tau subunits.
 
 
0.993
holA
DNA polymerase III delta subunit.
  
 
 0.993
dnaE1
DNA polymerase III alpha subunit.
  
 
 0.976
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.967
ACP33224.1
Hypothetical protein.
  
 0.937
dnaQ1
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
   
  0.922
dnaQ2
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
   
  0.922
dnaQ3
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
   
  0.922
dinG
Rad3-related DNA helicases.
 
 0.786
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.