Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP31862.1Hypothetical protein; Type II restriction enzyme, methylase subunits. (366 aa)    
Predicted Functional Partners:
ACP31865.1
Hypothetical protein; Type II restriction enzyme, methylase subunits.
    0.982
ACP31861.1
Putative ATP-dependent helicase; DNA or RNA helicases of superfamily II.
 
    0.967
ACP31860.1
Hypothetical protein.
 
  
 0.957
hsdM
Type I restriction-modification system methyltransferase subunit.
  
    0.438
ACP34064.1
Hypothetical protein; Restriction endonuclease S subunits.
  
    0.432
ACP32614.1
DNA or RNA helicases of superfamily II.
  
    0.405
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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