STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yknZMacrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component. (431 aa)    
Predicted Functional Partners:
ACP31917.1
Methionine import ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.999
ACP31918.1
Putative secreted protein; Membrane-fusion protein.
 
  
 0.996
ACP33720.1
Putative ABC transport system, ATP-binding protein; ABC-type antimicrobial peptide transport system ATPase component.
 
 0.995
ACP32402.1
Methionine import ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
 0.983
ACP32143.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
 0.964
ACP32069.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
 0.963
ACP33843.1
ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.959
ACP33271.1
Putative ABC transport system, ATP-binding protein; ABC-type antimicrobial peptide transport system ATPase component.
 
 0.958
ACP34043.1
ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.957
ftsE
Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
     0.889
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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