Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP31921.1 | ccdA | cauri_0322 | cauri_0324 | Putative phosphoglycerate mutase; Fructose-26-bisphosphatase. | Cytochrome c biogenesis protein. | 0.894 |
ACP31921.1 | ccsX | cauri_0322 | cauri_0323 | Putative phosphoglycerate mutase; Fructose-26-bisphosphatase. | Thiol-disulfide isomerase and thioredoxins. | 0.988 |
ACP31921.1 | hemL | cauri_0322 | cauri_0321 | Putative phosphoglycerate mutase; Fructose-26-bisphosphatase. | Glutamate-1-semialdehyde aminotransferase. | 0.942 |
ccdA | ACP31921.1 | cauri_0324 | cauri_0322 | Cytochrome c biogenesis protein. | Putative phosphoglycerate mutase; Fructose-26-bisphosphatase. | 0.894 |
ccdA | ccsX | cauri_0324 | cauri_0323 | Cytochrome c biogenesis protein. | Thiol-disulfide isomerase and thioredoxins. | 0.998 |
ccdA | ctaD | cauri_0324 | cauri_2108 | Cytochrome c biogenesis protein. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.812 |
ccdA | ctaE | cauri_0324 | cauri_1699 | Cytochrome c biogenesis protein. | Heme/copper-type cytochrome/quinol oxidase subunit 3. | 0.806 |
ccdA | hemA | cauri_0324 | cauri_0298 | Cytochrome c biogenesis protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.910 |
ccdA | hemE | cauri_0324 | cauri_0304 | Cytochrome c biogenesis protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.930 |
ccdA | hemL | cauri_0324 | cauri_0321 | Cytochrome c biogenesis protein. | Glutamate-1-semialdehyde aminotransferase. | 0.980 |
ccsX | ACP31921.1 | cauri_0323 | cauri_0322 | Thiol-disulfide isomerase and thioredoxins. | Putative phosphoglycerate mutase; Fructose-26-bisphosphatase. | 0.988 |
ccsX | ccdA | cauri_0323 | cauri_0324 | Thiol-disulfide isomerase and thioredoxins. | Cytochrome c biogenesis protein. | 0.998 |
ccsX | ctaD | cauri_0323 | cauri_2108 | Thiol-disulfide isomerase and thioredoxins. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.841 |
ccsX | ctaE | cauri_0323 | cauri_1699 | Thiol-disulfide isomerase and thioredoxins. | Heme/copper-type cytochrome/quinol oxidase subunit 3. | 0.912 |
ccsX | hemA | cauri_0323 | cauri_0298 | Thiol-disulfide isomerase and thioredoxins. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.922 |
ccsX | hemB | cauri_0323 | cauri_0301 | Thiol-disulfide isomerase and thioredoxins. | Porphobilinogen synthase; Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.462 |
ccsX | hemE | cauri_0323 | cauri_0304 | Thiol-disulfide isomerase and thioredoxins. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.954 |
ccsX | hemL | cauri_0323 | cauri_0321 | Thiol-disulfide isomerase and thioredoxins. | Glutamate-1-semialdehyde aminotransferase. | 0.993 |
ctaD | ccdA | cauri_2108 | cauri_0324 | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Cytochrome c biogenesis protein. | 0.812 |
ctaD | ccsX | cauri_2108 | cauri_0323 | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Thiol-disulfide isomerase and thioredoxins. | 0.841 |
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