Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ccsXThiol-disulfide isomerase and thioredoxins. (201 aa)    
Predicted Functional Partners:
ccdA
Cytochrome c biogenesis protein.
 
  
 0.994
hemL
Glutamate-1-semialdehyde aminotransferase.
  
  
 0.993
ACP31921.1
Putative phosphoglycerate mutase; Fructose-26-bisphosphatase.
  
   0.987
ccsA
ABC-type transport system involved in cytochrome c biogenesis permease component.
  
  
 0.976
ccsB
ResB protein required for cytochrome c biosynthesis.
 
  
 0.971
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.944
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.914
ctaE
Heme/copper-type cytochrome/quinol oxidase subunit 3.
  
   
 0.873
hmuO
Heme oxygenase.
      
 0.798
ahpC
Alkyl hydroperoxide reductase; Peroxiredoxin.
  
 0.780
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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