STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccsBResB protein required for cytochrome c biosynthesis. (543 aa)    
Predicted Functional Partners:
ccdA
Cytochrome c biogenesis protein.
 
  
 0.985
ccsA
ABC-type transport system involved in cytochrome c biogenesis permease component.
 
  
 0.984
ccsX
Thiol-disulfide isomerase and thioredoxins.
 
  
 0.973
ACP31921.1
Putative phosphoglycerate mutase; Fructose-26-bisphosphatase.
 
    0.898
hemL
Glutamate-1-semialdehyde aminotransferase.
  
  
 0.800
qcrC
Cytochrome c mono- and diheme variants.
 
  
 0.793
hemD
uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase; Uroporphyrinogen-III synthase.
 
    0.785
ACP31843.1
Thiol:disulfide interchange protein.
  
  
 0.766
qcrA
Ubiquinol-cytochrome c reductase iron-sulfur protein.
  
     0.762
ctaF
Putative membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.737
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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