Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
ACP31956.1Uncharacterized protein conserved in bacteria. (433 aa)    
Predicted Functional Partners:
ACP31955.1
Diaminopimelate decarboxylase.
     0.968
cysM
Cystathionine beta-synthase; Cysteine synthase.
 
  
 0.870
ACP33637.1
Uncharacterized protein conserved in bacteria.
 
     0.607
ACP33970.1
Transposase and inactivated derivatives.
  
     0.518
ACP31760.1
Putative membrane protein; FOG: Glucan-binding domain (YG repeat).
  
     0.487
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.482
ACP33849.1
Transcriptional regulator, MarR family; Transcriptional regulators.
  
     0.465
ACP32146.1
Transposase and inactivated derivatives.
  
     0.419
ACP32718.1
Transposase and inactivated derivatives.
  
     0.419
ACP31872.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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