STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ykoDPutative ABC transport system, ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (478 aa)    
Predicted Functional Partners:
ACP31973.1
Permease of the major facilitator superfamily; ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.992
ACP31971.1
Putative HMP/thiamine permease protein; Predicted membrane protein.
 
  
 0.909
ACP31974.1
Putative pantoate ligase/cytidylate kinase; Adenylate kinase and related kinases.
 
    0.731
ACP32384.1
Putative ABC transport system, permease protein.
 
 
 0.632
bioN
ABC-type cobalt transport system permease component CbiQ and related transporters.
 
 
 0.539
ACP31909.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components.
  
     0.499
bioM
Putative ABC transport system, ATP-binding protein; ABC-type cobalt transport system ATPase component.
 
  
0.403
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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