STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon sensor protein phoR; Signal transduction histidine kinase. (376 aa)    
Predicted Functional Partners:
ACP32067.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.973
nreC3
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.873
tcsR3
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.863
chrA
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.862
tcsR4
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.860
ACP31624.1
Putative transcriptional regulator; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.859
tcsR2
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.857
ACP32087.1
Putative transcription regulator; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.856
ACP33427.1
Putative membrane protein; Signal transduction histidine kinase.
  
     0.764
ACP32069.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components.
  
    0.618
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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