STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP32166.1Putative arabinose-binding protein; ABC-type sugar transport system, periplasmic component. (429 aa)    
Predicted Functional Partners:
ACP32164.1
ABC-type sugar transport system, permease component.
 
 
 0.999
ACP32165.1
ABC-type sugar transport systems, permease components.
 
 0.997
ACP32167.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.969
ACP32870.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.940
ACP32874.1
ABC-type sugar transport system, permease component.
 
 
 0.912
msmF
ABC-type sugar transport systems, permease components.
 
 
 0.908
ACP32163.1
Putative membrane protein.
       0.646
treS
Trehalose synthase; Glycosidases.
  
  
 0.585
birA
Biotin holoenzyme synthetase; Biotin-(acetyl-CoA carboxylase) ligase.
     
 0.517
cmtC
Trehalose corynomycolyl transferase C; Predicted esterase.
  
   
 0.405
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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