Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
proX1ABC-type proline/glycine betaine transport systems, periplasmic components. (299 aa)    
Predicted Functional Partners:
proW
ABC-type proline/glycine betaine transport system, permease component.
 
 0.999
proV
ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.996
proX2
ABC-type proline/glycine betaine transport systems, periplasmic components.
 
  
 
0.958
ykoD
Putative ABC transport system, ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
     
  0.540
ACP32166.1
Putative arabinose-binding protein; ABC-type sugar transport system, periplasmic component.
     
  0.540
ACP32167.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
  0.540
ACP32383.1
Putative ABC transport system, ATP-binding protein; ABC-type cobalt transport system ATPase component.
     
  0.540
ACP32870.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
  0.540
bioM
Putative ABC transport system, ATP-binding protein; ABC-type cobalt transport system ATPase component.
     
  0.540
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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