STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifANif-specific regulatory protein; Sugar diacid utilization regulator. (572 aa)    
Predicted Functional Partners:
hyuB
N-methylhydantoinase B/acetone carboxylase, alpha subunit.
 
     0.706
manP
Phosphotransferase system, fructose-specific IIC component.
      
 0.664
ptsF
Phosphotransferase system, fructose-specific IIC component.
      
 0.664
adhC
Zn-dependent alcohol dehydrogenases, class III.
       0.655
hyuA
N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
     0.648
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM; Uncharacterized protein conserved in bacteria.
    
 
 0.422
ptsH
Phosphotransferase system, HPr-related proteins.
    
 
 0.422
ACP31840.1
Putative secreted protein.
  
     0.400
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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