STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lipNPutative lipase/esterase; Esterase/lipase. (326 aa)    
Predicted Functional Partners:
ACP32239.1
Flavin-binding monooxygenase-like protein; Predicted flavoprotein involved in K+ transport.
  
 0.932
pks13
Polyketide synthase modules and related proteins.
  
 
 0.756
gabT1
4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.648
ACP32707.1
Hypothetical protein.
  
   0.597
qcrA
Ubiquinol-cytochrome c reductase iron-sulfur protein.
    
   0.572
ACP32237.1
Uncharacterized membrane protein.
       0.532
ACP33345.1
Hypothetical protein; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.477
fadD4
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.421
ACP32151.1
Hypothetical protein.
    
   0.412
ACP33889.1
Hypothetical protein.
    
   0.412
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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