STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP32242.1Hypothetical protein; Regulator of polyketide synthase expression. (481 aa)    
Predicted Functional Partners:
ACP32244.1
Putative sodium-coupled neutral amino acid transporter 10; Amino acid permeases.
 
   
 0.743
gabT2
4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.682
uspA4
Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.631
hpaX
Putative amino-acid permease; Amino acid transporters.
  
     0.462
ACP31671.1
Uncharacterized protein conserved in bacteria.
  
     0.424
ACP32934.1
Putative secreted protein; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.416
ACP31891.1
Hypothetical protein.
  
     0.413
ACP31732.1
Hypothetical protein; Regulator of polyketide synthase expression.
  
     0.404
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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