Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP32266.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
manA
Phosphomannose isomerase.
  
    0.871
lppL
Prolipoprotein LppL.
  
     0.767
ACP34116.1
Putative membrane protein.
  
     0.766
ptsS
PTS system, sucrose-specific IIBC component; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
  
 0.764
ptsG
PTS system, glucose-specific IIABC component; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
  
 0.764
pmmB
Phosphomannomutase.
  
  
 0.759
ACP33888.1
Hypothetical protein.
  
     0.756
ACP31872.1
Hypothetical protein.
  
     0.748
ACP32754.1
Putative membrane protein.
  
     0.748
ACP33749.1
Putative secreted protein.
  
     0.746
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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