STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP32268.1DNA-directed RNA polymerase II subunit; Exoribonuclease R. (316 aa)    
Predicted Functional Partners:
ACP32154.1
Hypothetical protein.
  
     0.669
ACP32056.1
Zinc metalloprotease; PPE-repeat proteins.
  
     0.609
mtrA
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  
 0.593
ACP31698.1
Hypothetical protein; Esterase/lipase.
  
     0.579
ACP31776.1
Putative protein rhsE; Rhs family protein.
  
   
 0.566
ACP32269.1
Hypothetical protein.
       0.558
tetA
ABC-type multidrug transport system ATPase and permease components.
  
     0.555
ACP32875.1
Putative membrane protein.
  
    0.541
tmk
Thymidylate kinase.
       0.528
ACP31760.1
Putative membrane protein; FOG: Glucan-binding domain (YG repeat).
  
     0.511
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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