sigH protein (Corynebacterium aurimucosum) - STRING interaction network

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Score

sigH

ECF-family sigma factor H; DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (204 aa)

Predicted Functional Partners:

rpoB

0.987

rpoC

0.987

sigB

0.896

sigD

0.799

rpoA

0.758

rpoZ

0.723

ACP32285.1

0.710

pknB

0.651

sigC

0.640

trxB

0.584

Your Current Organism:

Corynebacterium aurimucosum

NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP32285.1	sigH	cauri_0688	cauri_0689	Hypothetical protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.	ECF-family sigma factor H; DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.710
pknB	sigH	cauri_0029	cauri_0689	Serine/threonine protein kinase.	ECF-family sigma factor H; DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.651
rpoA	rpoB	cauri_0445	cauri_0368	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	cauri_0445	cauri_0369	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	cauri_0445	cauri_1183	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoA	sigB	cauri_0445	cauri_1461	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor B; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.989
rpoA	sigC	cauri_0445	cauri_0193	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.406
rpoA	sigD	cauri_0445	cauri_0478	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.406
rpoA	sigH	cauri_0445	cauri_0689	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF-family sigma factor H; DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.758
rpoB	rpoA	cauri_0368	cauri_0445	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	cauri_0368	cauri_0369	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	cauri_0368	cauri_1183	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoB	sigB	cauri_0368	cauri_1461	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor B; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.994
rpoB	sigC	cauri_0368	cauri_0193	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.538
rpoB	sigD	cauri_0368	cauri_0478	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.538
rpoB	sigH	cauri_0368	cauri_0689	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF-family sigma factor H; DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.	0.987
rpoC	rpoA	cauri_0369	cauri_0445	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	cauri_0369	cauri_0368	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoZ	cauri_0369	cauri_1183	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoC	sigB	cauri_0369	cauri_1461	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor B; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.993

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