STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP32296.1Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily. (1070 aa)    
Predicted Functional Partners:
ACP32295.1
Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.
 
 
   0.999
ACP32299.1
Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases.
 
 
 
0.986
pcrA
Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases.
 
 
 
0.948
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
 
 
 0.825
ACP33224.1
Hypothetical protein.
  
  
 0.806
ACP32297.1
Transport protein of the voltage-gated ion channel superfamily; Kef-type K+ transport systems predicted NAD- binding component.
       0.753
ACP32298.1
Putative NADH pyrophosphatase; NTP pyrophosphohydrolases containing a Zn- finger, probably nucleic-acid-binding.
       0.753
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.729
pheT
Phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
   0.710
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
 
  
 0.710
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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