STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP32296.1Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily. (1070 aa)    
Predicted Functional Partners:
ACP32295.1
Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.
 
 
  0.997
ACP32299.1
Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases.
 
 
 
0.984
pcrA
Putative ATP-dependent DNA helicase II; Superfamily I DNA and RNA helicases.
 
 
 
0.943
ACP33224.1
Hypothetical protein.
  
  
 0.848
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.793
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
 
 
 0.792
radA
DNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
  
 0.761
uvrC
Excinuclease ABC, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
  
 0.744
ACP32297.1
Transport protein of the voltage-gated ion channel superfamily; Kef-type K+ transport systems predicted NAD- binding component.
       0.738
ACP32298.1
Putative NADH pyrophosphatase; NTP pyrophosphohydrolases containing a Zn- finger, probably nucleic-acid-binding.
       0.738
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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