Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP32442.1 | ACP32443.1 | cauri_0845 | cauri_0846 | Permeases of the major facilitator superfamily. | Plasmid maintenance system antidote protein. | 0.591 |
ACP32442.1 | betP1 | cauri_0845 | cauri_0843 | Permeases of the major facilitator superfamily. | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.608 |
ACP32442.1 | metS | cauri_0845 | cauri_0844 | Permeases of the major facilitator superfamily. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.844 |
ACP32443.1 | ACP32442.1 | cauri_0846 | cauri_0845 | Plasmid maintenance system antidote protein. | Permeases of the major facilitator superfamily. | 0.591 |
ACP32443.1 | ACP32566.1 | cauri_0846 | cauri_0969 | Plasmid maintenance system antidote protein. | Hypothetical protein; Plasmid maintenance system killer protein. | 0.915 |
ACP32443.1 | betP1 | cauri_0846 | cauri_0843 | Plasmid maintenance system antidote protein. | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.447 |
ACP32443.1 | metS | cauri_0846 | cauri_0844 | Plasmid maintenance system antidote protein. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.591 |
ACP32566.1 | ACP32443.1 | cauri_0969 | cauri_0846 | Hypothetical protein; Plasmid maintenance system killer protein. | Plasmid maintenance system antidote protein. | 0.915 |
betP1 | ACP32442.1 | cauri_0843 | cauri_0845 | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Permeases of the major facilitator superfamily. | 0.608 |
betP1 | ACP32443.1 | cauri_0843 | cauri_0846 | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Plasmid maintenance system antidote protein. | 0.447 |
betP1 | metS | cauri_0843 | cauri_0844 | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.608 |
metS | ACP32442.1 | cauri_0844 | cauri_0845 | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Permeases of the major facilitator superfamily. | 0.844 |
metS | ACP32443.1 | cauri_0844 | cauri_0846 | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Plasmid maintenance system antidote protein. | 0.591 |
metS | betP1 | cauri_0844 | cauri_0843 | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.608 |