STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP32580.1Putative membrane protein. (187 aa)    
Predicted Functional Partners:
dapC
Succinyldiaminopimelate aminotransferase.
 
     0.724
ACP33453.1
Putative membrane protein.
  
     0.696
fdxA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.677
ACP32579.1
Pseudouridylate synthases 23S RNA-specific.
       0.677
ACP32266.1
Hypothetical protein.
  
     0.660
mshB
MshB deacetylase; Uncharacterized proteins LmbE homologs.
       0.615
ACP32576.1
Putative membrane protein.
       0.615
ACP31760.1
Putative membrane protein; FOG: Glucan-binding domain (YG repeat).
  
     0.596
ACP32574.1
Putative secreted protein.
       0.594
mptA
Alpha mannopyranosyltransferase.
 
  
 0.570
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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