Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACP33325.1 | hom | cauri_1732 | cauri_1049 | Threonine synthase. | Homoserine dehydrogenase. | 0.983 |
| ACP33325.1 | ilvA | cauri_1732 | cauri_1638 | Threonine synthase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.956 |
| ACP33325.1 | thrB | cauri_1732 | cauri_1050 | Threonine synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
| cysE | hom | cauri_2145 | cauri_1049 | Serine acetyltransferase. | Homoserine dehydrogenase. | 0.814 |
| cysE | ilvA | cauri_2145 | cauri_1638 | Serine acetyltransferase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.811 |
| cysE | metB | cauri_2145 | cauri_2045 | Serine acetyltransferase. | Cystathionine beta-lyases/cystathionine gamma- synthases. | 0.443 |
| cysE | sdaA | cauri_2145 | cauri_1402 | Serine acetyltransferase. | L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.908 |
| cysE | thrB | cauri_2145 | cauri_1050 | Serine acetyltransferase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.818 |
| hom | ACP33325.1 | cauri_1049 | cauri_1732 | Homoserine dehydrogenase. | Threonine synthase. | 0.983 |
| hom | cysE | cauri_1049 | cauri_2145 | Homoserine dehydrogenase. | Serine acetyltransferase. | 0.814 |
| hom | ilvA | cauri_1049 | cauri_1638 | Homoserine dehydrogenase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.864 |
| hom | ilvE | cauri_1049 | cauri_1706 | Homoserine dehydrogenase. | Branched-chain amino acid aminotransferase/4- amino-4-deoxychorismate lyase. | 0.864 |
| hom | metB | cauri_1049 | cauri_2045 | Homoserine dehydrogenase. | Cystathionine beta-lyases/cystathionine gamma- synthases. | 0.903 |
| hom | metE | cauri_1049 | cauri_0020 | Homoserine dehydrogenase. | Methionine synthase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.845 |
| hom | sdaA | cauri_1049 | cauri_1402 | Homoserine dehydrogenase. | L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.821 |
| hom | thrB | cauri_1049 | cauri_1050 | Homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
| hom | yhcE | cauri_1049 | cauri_1643 | Homoserine dehydrogenase. | Putative epoxyalkane:coenzyme M transferase; Methionine synthase II (cobalamin-independent). | 0.845 |
| ilvA | ACP33325.1 | cauri_1638 | cauri_1732 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Threonine synthase. | 0.956 |
| ilvA | cysE | cauri_1638 | cauri_2145 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Serine acetyltransferase. | 0.811 |
| ilvA | hom | cauri_1638 | cauri_1049 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Homoserine dehydrogenase. | 0.864 |
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