STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP32676.1Putative Periplasmic oligopeptide-binding protein; ABC-type oligopeptide transport system, periplasmic component. (546 aa)    
Predicted Functional Partners:
dppB
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.983
dppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.982
dppA
ABC-type oligopeptide transport system, periplasmic component.
  
 
 
0.911
ACP33351.1
Putative Periplasmic oligopeptide-binding protein; ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.909
gntP
H+/gluconate symporter and related permeases.
   
    0.754
sdhC
Succinate dehydrogenase subunit.
   
    0.735
arsX
Arsenate reductase; Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.662
ACP33419.1
ABC-type dipeptide transport system, periplasmic component.
 
 
 0.564
oppB2
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.535
ACP32673.1
Hypothetical protein.
 
     0.534
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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