STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaQ2DNA polymerase III epsilon subunit and related 3-5 exonucleases. (233 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
  
 0.961
dnaX
DNA polymerase III gamma/tau subunits.
   
 0.959
dnaE1
DNA polymerase III alpha subunit.
   
 0.945
holA
DNA polymerase III delta subunit.
    
 0.932
holB
DNA polymerase III, delta' subunit; ATPase involved in DNA replication.
   
  0.922
dnaQ1
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
  
  
  0.918
ACP33224.1
Hypothetical protein.
 
  
 0.918
dnaQ3
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
     
 
0.900
ACP32696.1
Putative membrane protein; Beta-lactamase class C and other penicillin binding proteins.
       0.724
ACP32697.1
Hypothetical protein; Predicted transcriptional regulators.
       0.724
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.