STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnaQ2DNA polymerase III epsilon subunit and related 3-5 exonucleases. (233 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase sliding clamp subunit (PCNA homolog).
   
 0.948
dnaX
DNA polymerase III gamma/tau subunits.
    
 0.946
dnaE1
DNA polymerase III alpha subunit.
   
 0.943
holA
DNA polymerase III delta subunit.
    
 0.927
holB
DNA polymerase III, delta' subunit; ATPase involved in DNA replication.
    
  0.922
ACP33224.1
Hypothetical protein.
 
  
 0.920
dnaQ1
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
  
  
  0.918
dnaQ3
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
     
 
0.900
recN
Recombination and DNA repair; May be involved in recombinational repair of damaged DNA.
  
  
 0.753
ACP32696.1
Putative membrane protein; Beta-lactamase class C and other penicillin binding proteins.
       0.706
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.