STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysGLysine export transcriptional regulatory protein; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
lysE
Lysine exporter protein; Lysine efflux permease.
 
   
 0.977
ACP32716.1
Putative membrane protein.
       0.782
lytR1
Transcriptional regulator, LytR family.
   
    0.696
sufR
Predicted transcriptional regulator.
   
    0.661
ACP32468.1
Transcriptional regulators.
  
    0.577
ACP33667.1
Transcriptional regulator.
   
   0.547
mntR
Manganese-dependent repressor MntR; Mn-dependent transcriptional regulator.
   
   0.520
ACP33484.1
Mn-dependent transcriptional regulator.
   
   0.520
ACP31670.1
Putative sir2-like regulatory protein; NAD-dependent protein deacetylases, SIR2 family.
   
    0.511
cobB
NAD-dependent protein deacetylases SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.511
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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