Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sapDPutative surface-anchored protein. (367 aa)    
Predicted Functional Partners:
ACP32737.1
Putative secreted protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
0.887
ACP32739.1
Putative membrane protein.
 
    
0.866
ACP32734.1
Putative membrane protein; Surface antigen.
  
     0.774
rpmF
Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
   
 0.757
ACP32735.1
ABC-type Mn2+/Zn2+ transport systems permease components.
 
     0.693
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
   
  
 0.626
rpmG
Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.621
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
      
 0.618
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
      
 0.618
rpmE
Ribosomal protein L31.
      
 0.618
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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