STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsAGlycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (332 aa)    
Predicted Functional Partners:
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.929
tagD
Glycerol-3-phosphate cytidyltransferase; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase.
 
  
 0.924
cmk1
Cytidylate kinase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.897
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.892
ddlA
D-alanine-D-alanine ligase; Cell wall formation.
     
 0.840
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM; Uncharacterized protein conserved in bacteria.
   
 
  0.813
dak1
Dihydroxyacetone kinase.
   
 
 0.811
dhaL
Dihydroxyacetone kinase.
   
 
 0.811
ACP32004.1
Putative ABC transport system; Predicted GTPases (dynamin-related).
  
  
 0.724
fas-IB
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
 
  
 0.712
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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