Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sufRPredicted transcriptional regulator. (236 aa)    
Predicted Functional Partners:
sufD
ABC-type transport system involved in Fe-S cluster assembly permease component.
 
  
 0.963
sufB
ABC-type transport system involved in Fe-S cluster assembly permease component.
  
  
 0.949
sufC
ABC-type transport system involved in Fe-S cluster assembly ATPase component.
  
  
 0.944
nifU
NifU homolog involved in Fe-S cluster formation.
  
  
 0.768
ACP32814.1
Predicted metal-sulfur cluster biosynthetic enzyme.
     
 0.756
ahpD
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.
      
 0.740
mntR
Manganese-dependent repressor MntR; Mn-dependent transcriptional regulator.
   
  
 0.731
ACP33342.1
Hypothetical protein.
  
     0.697
oxyR
Transcriptional regulator, LysR family; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
  
 0.687
lytR1
Transcriptional regulator, LytR family.
  
    0.687
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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