STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufRPredicted transcriptional regulator. (236 aa)    
Predicted Functional Partners:
sufB
ABC-type transport system involved in Fe-S cluster assembly permease component.
  
    0.960
sufD
ABC-type transport system involved in Fe-S cluster assembly permease component.
 
    0.838
sufC
ABC-type transport system involved in Fe-S cluster assembly ATPase component.
  
    0.752
lytR1
Transcriptional regulator, LytR family.
  
    0.727
nifU
NifU homolog involved in Fe-S cluster formation.
  
  
 0.710
ACP33342.1
Hypothetical protein.
  
     0.697
ACP32805.1
ABC-type multidrug transport system permease component.
 
     0.696
ACP32806.1
Putative ABC transport system, ATP-binding protein; ABC-type multidrug transport system ATPase component.
       0.686
mptB
Alpha mannopyranosyltransferase.
       0.686
lysG
Lysine export transcriptional regulatory protein; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.661
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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