Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lppLProlipoprotein LppL. (343 aa)    
Predicted Functional Partners:
ACP32290.1
Putative secreted protein.
 
  
 0.773
ACP32305.1
Hypothetical protein.
  
     0.773
ACP33888.1
Hypothetical protein.
  
     0.771
ACP34116.1
Putative membrane protein.
  
     0.769
ACP33665.1
Putative membrane protein.
  
     0.768
ACP32266.1
Hypothetical protein.
  
     0.767
ACP33749.1
Putative secreted protein.
  
     0.766
ACP34009.1
Putative secreted protein.
  
     0.764
ACP32754.1
Putative membrane protein.
  
     0.762
ACP31945.1
Putative secreted protein.
  
     0.761
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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