STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcuAAnaerobic C4-dicarboxylate transporter. (435 aa)    
Predicted Functional Partners:
aspA
Aspartate ammonia-lyase.
 
  
 0.772
fhs
Formyltetrahydrofolate synthetase; Belongs to the formate--tetrahydrofolate ligase family.
       0.722
yhcL
C4-dicarboxylate transporter.
  
   
 0.691
tdcC2
Threonine/serine transporter; Amino acid permeases.
  
    0.562
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
       0.540
sdaC
Threonine/serine transporter; Amino acid permeases.
  
    0.536
tdcC1
Threonine/serine transporter; Amino acid permeases.
  
    0.531
ACP32061.1
Putative membrane protein; Predicted permease.
  
     0.507
hisE2
Phosphoribosyl-ATP pyrophosphohydrolase.
       0.506
ACP32844.1
Hypothetical protein.
       0.489
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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