STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pepEPutative dipeptidase; Xaa-Pro aminopeptidase. (396 aa)    
Predicted Functional Partners:
fabG4
Short-chain alcohol dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
    0.838
ACP32863.1
Hypothetical protein; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
  
 0.661
ACP32046.1
Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
     
 0.487
hisS
Histidyl-tRNA synthetase.
 
 
 0.469
ACP33796.1
Transcriptional regulator, LacI family; Transcriptional regulators.
 
 
 0.430
ACP32867.1
Putative membrane protein; Protein affecting phage T7 exclusion by the F plasmid.
 
     0.426
trpC2
Indole-3-glycerol phosphate synthase; Belongs to the TrpF family.
  
  
 0.422
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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