STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG4Short-chain alcohol dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (254 aa)    
Predicted Functional Partners:
pepE
Putative dipeptidase; Xaa-Pro aminopeptidase.
  
    0.852
ACP31702.1
FAD/FMN-containing dehydrogenases.
 
  
 0.791
ubiA
Decaprenylphosphoryl-5-phosphoribose synthase; 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.790
ACP31706.1
Predicted membrane protein.
 
     0.697
ACP32863.1
Hypothetical protein; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
    0.687
ACP31707.1
Predicted membrane protein.
 
     0.670
ACP31913.1
Putative secreted protein; Uncharacterized protein potentially involved in peptidoglycan biosynthesis.
  
     0.458
pks13
Polyketide synthase modules and related proteins.
  
 
 0.426
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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