STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cobGCobalamin biosynthesis protein; Sulfite reductase, beta subunit (hemoprotein). (279 aa)    
Predicted Functional Partners:
molB
ABC-type sugar transport systems, ATPase components.
  
  
 0.785
cysN
Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.780
aftC
Arabinofuranosyl transferase C.
  
     0.772
ACP33961.1
Putative carbohydrate esterase.
  
     0.771
ACP33965.1
Putative membrane protein.
  
     0.770
ACP32325.1
Putative secreted protein.
  
     0.767
ACP32370.1
Putative secreted protein; Aspartate/tyrosine/aromatic aminotransferase.
  
    0.767
ACP32536.1
Uncharacterized membrane protein, required for N-linked glycosylation.
  
     0.766
ACP33208.1
Putative membrane protein.
  
     0.766
aftA
Arabinofuranosyl transferase A.
  
     0.764
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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