STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfaCyclopropane fatty acid synthase and related methyltransferases. (430 aa)    
Predicted Functional Partners:
pks13
Polyketide synthase modules and related proteins.
     
 0.681
cma
Putative cyclopropane-fatty-acyl-phospholipid synthase; Cyclopropane fatty acid synthase and related methyltransferases.
 
     0.680
ndh
NADH dehydrogenase FAD-containing subunit.
       0.669
ACP31671.1
Uncharacterized protein conserved in bacteria.
  
     0.528
ACP31840.1
Putative secreted protein.
  
     0.511
lytR1
Transcriptional regulator, LytR family.
   
    0.509
ACP31698.1
Hypothetical protein; Esterase/lipase.
  
   
 0.469
ACP32076.1
Hypothetical protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.459
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
       0.456
ACP33227.1
Uncharacterized protein conserved in bacteria.
  
     0.448
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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