sigA protein (Corynebacterium aurimucosum) - STRING interaction network

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sigA

RNA polymerase sigma factor A; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (485 aa)

Predicted Functional Partners:

rpoB

0.950

rpoC

0.935

rpoA

0.919

rbpA

0.901

rpoZ

0.888

carD

0.881

whiA

0.791

glxR

0.757

whiB1

0.757

ACP32958.1

0.754

Your Current Organism:

Corynebacterium aurimucosum

NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP32958.1	rbpA	cauri_1365	cauri_1283	Superfamily I DNA and RNA helicases.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.800
ACP32958.1	rpoA	cauri_1365	cauri_0445	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.820
ACP32958.1	rpoB	cauri_1365	cauri_0368	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.879
ACP32958.1	rpoC	cauri_1365	cauri_0369	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.877
ACP32958.1	rpoZ	cauri_1365	cauri_1183	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.848
ACP32958.1	sigA	cauri_1365	cauri_1452	Superfamily I DNA and RNA helicases.	RNA polymerase sigma factor A; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.754
ACP32958.1	whiB1	cauri_1365	cauri_0691	Superfamily I DNA and RNA helicases.	WhiB transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.	0.480
carD	rbpA	cauri_2216	cauri_1283	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.967
carD	rpoA	cauri_2216	cauri_0445	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.945
carD	rpoB	cauri_2216	cauri_0368	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
carD	rpoC	cauri_2216	cauri_0369	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.954
carD	rpoZ	cauri_2216	cauri_1183	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.948
carD	sigA	cauri_2216	cauri_1452	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	RNA polymerase sigma factor A; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.881
glxR	rpoA	cauri_0205	cauri_0445	Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875
glxR	rpoB	cauri_0205	cauri_0368	Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.868
glxR	rpoC	cauri_0205	cauri_0369	Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.855
glxR	rpoZ	cauri_0205	cauri_1183	Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.842
glxR	sigA	cauri_0205	cauri_1452	Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.	RNA polymerase sigma factor A; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.757
rbpA	ACP32958.1	cauri_1283	cauri_1365	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	Superfamily I DNA and RNA helicases.	0.800
rbpA	carD	cauri_1283	cauri_2216	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	Putative transcription factor; Transcriptional regulators similar to M. xanthus CarD.	0.967

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