Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
bioYPutative BioY family protein. (213 aa)    
Predicted Functional Partners:
bioM
Putative ABC transport system, ATP-binding protein; ABC-type cobalt transport system ATPase component.
 
 
 0.998
bioN
ABC-type cobalt transport system permease component CbiQ and related transporters.
 
 0.997
ACP31973.1
Permease of the major facilitator superfamily; ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 0.951
ACP32384.1
Putative ABC transport system, permease protein.
  
 0.951
tetR
Transcriptional regulator, TetR family; Transcriptional regulator.
     
 0.768
ACP33095.1
Putative membrane protein.
       0.572
birA
Biotin holoenzyme synthetase; Biotin-(acetyl-CoA carboxylase) ligase.
 
   
 0.552
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.512
ACP31876.1
3-oxoacyl-(acyl-carrier-protein) synthase.
     
 0.497
fas-IB
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
     
 0.497
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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