Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
pbp2BCell division protein FtsI/penicillin-binding protein 2. (623 aa)    
Predicted Functional Partners:
pbp1B
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 
 0.934
pbp1A
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 
 0.924
ftsW
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.827
pbp4
D-alanyl-D-alanine carboxypeptidase (penicillin- binding protein 4).
  
   
 0.810
rodA
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.799
ftsQ
Cell division protein ftsQ; Essential cell division protein.
  
 
 0.784
dac
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 0.781
ispG
4-hydroxy-3-methylbut-2-enyl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
  
    0.760
mapB
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
     
 0.699
ACP32754.1
Putative membrane protein.
  
     0.682
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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