STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33147.1ABC-type transport system, permease component. (529 aa)    
Predicted Functional Partners:
ACP33148.1
Putative ABC transport system, ATP-binding protein; ABC-type multidrug transport system ATPase component.
 
  
 0.946
rlmN
Hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.714
ACP33150.1
Uncharacterized integral membrane protein.
 
    0.672
ACP32871.1
Hypothetical protein.
  
     0.589
ACP31698.1
Hypothetical protein; Esterase/lipase.
  
     0.557
tetA
ABC-type multidrug transport system ATPase and permease components.
  
     0.552
galK
Galactokinase.
  
     0.528
ACP32875.1
Putative membrane protein.
  
     0.524
ACP32244.1
Putative sodium-coupled neutral amino acid transporter 10; Amino acid permeases.
  
     0.507
aap
Putative surface protein; DNA-directed RNA polymerase, beta subunit/140 kD subunit.
  
     0.507
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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